Training materials
Scientific topics: Comparative transcriptomics
and Contributors: Saskia Hiltemann
and Across all spaces: true
42 materials found
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ELIXIR TeSS
e-learning
RNA-Seq data analysis, clustering and visualisation tutorial
• BeginnerTranscriptomics PCA Transcriptomics bulk clustering collections mouse rna-seq work-in-progress -
ELIXIR TeSS
e-learning
Genome-wide alternative splicing analysis
••• AdvancedTranscriptomics Transcriptomics alternative splicing isoform switching -
ELIXIR TeSS
e-learning
Pathway analysis with the MINERVA Platform
•• IntermediateTranscriptomics Transcriptomics bulk cyoa rna-seq viz -
ELIXIR TeSS
e-learning
RNA-seq Alignment with STAR
• BeginnerTranscriptomics Transcriptomics -
ELIXIR TeSS
slides
Introduction to Transcriptomics
• BeginnerTranscriptomics Transcriptomics -
ELIXIR TeSS
ErasmusMC-Bioinformatics/galaxy-courses
Sequencing Transcriptomics RNA-Seq Variant pattern analysis Galaxy Next generation sequencing RNA-seq Transcriptomics Variant analysis
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ELIXIR TeSS
e-learning
Inferring single cell trajectories with Monocle3
• BeginnerTranscriptomics MIGHTS Single Cell paper-replication -
ELIXIR TeSS
e-learning
Combining single cell datasets after pre-processing
• BeginnerTranscriptomics MIGHTS Single Cell paper-replication -
ELIXIR TeSS
e-learning
Inferring single cell trajectories with Scanpy (Python)
• BeginnerTranscriptomics MIGHTS Single Cell jupyter-notebook paper-replication -
ELIXIR TeSS
e-learning
RNA-RNA interactome data analysis
• BeginnerTranscriptomics Transcriptomics