Training materials
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ELIXIR TeSS
Intermediate Research Software Development Skills In Python
•• Intermediateintermediate Coding software engineering Carpentries Incubator -
ELIXIR TeSS
Slides, course materials, hands-on tutorial
Organisation and utilisation of hologenomic datasets – course notes
•• IntermediateMetatranscriptomics Sample collections Metabolomics Metagenomics hologenomics metagenomics Metabolomics MGnify Workshop -
ELIXIR TeSS
WEBINAR: Portable, reproducible and scalable bioinformatics workflows using Nextflow and Pawsey Nimbus Cloud
Bioinformatics Workflows Nextflow Containerisation
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ELIXIR TeSS
WORKSHOP: Single cell RNAseq analysis in R
Bioinformatics Analysis Transcriptomics R software Single cell RNAseq scRNAseq
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ELIXIR TeSS
Video, E-learning
FAIR principles in practice for health data
• BeginnerComputer science Data management FAIR data Medical informatics Standardisation and normalisation Design Clinical data RDF Knowledge graph Semantic framework … -
ELIXIR TeSS
e-learning
Combining single cell datasets after pre-processing
• BeginnerTranscriptomics MIGHTS Single Cell paper-replication -
ELIXIR TeSS
e-learning
Inferring single cell trajectories with Scanpy (Python)
• BeginnerTranscriptomics MIGHTS Single Cell jupyter-notebook paper-replication -
ELIXIR TeSS
e-learning
Comparative gene analysis in unannotated genomes
• BeginnerGenomics Gene and protein families Sequence analysis Phylogeny Comparative genomics Genome Annotation annotation biodiversity cookbook eukaryote … -
ELIXIR TeSS
WEBINAR: Getting started with whole genome mapping and variant calling on the command line
Genome mapping Variant calling Bioinformatics Workflows
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ELIXIR TeSS
Webinar, Training materials
Exploring structural and functional annotations of IDPs with DisProt
•• IntermediateCuration Databases Ontologies Intrinsically disordered proteins Protein sequence analysis Protein function analysis