Training materials
-
Prepare Data from CbioPortal for Flexynesis Integration
flexynesis
-
Train and Test a Deep learning image classifier with Galaxy-Ludwig
Deep learning Ludwig MNIST
-
Multi-sample batch correction with Harmony and SnapATAC2
10x epigenetics scmultiomics
-
Plates, Batches, and Barcodes
scintroduction
-
Inferring single cell trajectories with Scanpy (Python)
MIGHTS jupyter-notebook paper-replication single-cell-CS-code
-
Inferring single cell trajectories with Scanpy
MIGHTS paper-replication single-cell-CS
-
Matrix Exchange Format to ESet | Creating a single-cell RNA-seq reference dataset for deconvolution
data management datamanipulation
-
Single-cell Formats and Resources
scintroduction
-
Inferring single cell trajectories with Monocle3 (R)
MIGHTS jupyter-notebook paper-replication rmarkdown-notebook single-cell-CS-code
-
Inferring single cell trajectories with Monocle3
MIGHTS paper-replication single-cell-CS