Training materials
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Using BioImage.IO models for image analysis in Galaxy
Deep learning Image annotation Image segmentation analyses
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Quantification of single-molecule RNA fluorescence in situ hybridization (smFISH) in yeast cell lines
IDR dataset Overlay Rasterisation Spot detection analyses
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Object tracking using CellProfiler
Isolated object tracking Multi-channel image analyses
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Quantification of electrophoresis gel bands using QuPath and Galaxy imaging tools
Conversion Multi-channel image Object feature extraction ROI selection analyses
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Nucleoli segmentation and feature extraction using CellProfiler
Image segmentation Multi-channel image Object feature extraction analyses
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Voronoi segmentation
Image segmentation Multi-channel image Object counting Overlay Tessellation analyses
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Tracking of mitochondria and capturing mitoflashes
Isolated object tracking Temporal analysis Time-lapse data analyses
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End-to-End Tissue Microarray Image Analysis with Galaxy-ME
Image segmentation Tissue imaging analyses
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Analyse HeLa fluorescence siRNA screen
Fluorescence microscopy High-throughput screening Image segmentation Image thresholding Object feature extraction analyses