Training materials
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Identifying tuberculosis transmission links: from SNPs to transmission clusters
microgalaxy one-health prokaryote
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Tree thinking for tuberculosis evolution and epidemiology
microgalaxy one-health phylogenetics prokaryote
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Phylogenetic analysis for bacterial comparative genomics
microgalaxy work-in-progress
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Checking expected species and contamination in bacterial isolate
bacteria ecologypreprocess illumina microgalaxy
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Making sense of a newly assembled genome
gmod jbrowse1 microgalaxy prokaryote
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Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)
amr assembly microgalaxy nanopore
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Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data
assembly illumina microgalaxy
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Unicycler Assembly
biodiversity microgalaxy prokaryote
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Assembly of metagenomic sequencing data
assembly metagenomics microgalaxy