Training materials
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Genome annotation with Maker
eukaryote gmod jbrowse1 maker
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Functional annotation of protein sequences
biodiversity eukaryote
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Refining Genome Annotations with Apollo (eukaryotes)
apollo2 biodiversity cyoa eukaryote gmod jbrowse1
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Long non-coding RNAs (lncRNAs) annotation with FEELnc
eukaryote
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Genome annotation with Prokka
gmod jbrowse1 microgalaxy prokaryote
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From small to large-scale genome comparison
plants prokaryote
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Identification of AMR genes in an assembled bacterial genome
amr gmod illumina jbrowse1 microgalaxy one-health prokaryote
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Comparison of two annotation tools - Helixer and Braker3
Braker3 Helixer biodiversity eukaryota eukaryote jbrowse1
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Masking repeats with RepeatMasker
biodiversity eukaryote
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Secondary metabolite discovery
work-in-progress