Training materials
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Introduction to Microbiome Analysis
intro
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Analyses of metagenomics data - The global picture
intro microgalaxy
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Antibiotic resistance detection
amr assembly metabarcoding microgalaxy nanopore plasmids
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MGnify v5.0 Amplicon Pipeline
amplicon metabarcoding microbiome taxonomic abundance taxonomy
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Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition
Heatmap Nanopore data analysis Pathogens detection Phylogenetic tree cyoa metagenomics microgalaxy
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Clinical Metaproteomics 2: Discovery
clinical-metaproteomics label-TMT11
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Clinical Metaproteomics 4: Quantitation
clinical-metaproteomics label-TMT11
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Finding the muon stopping site with pymuon-suite in Galaxy
muon-spectroscopy
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Mass spectrometry: LC-MS analysis
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Mass spectrometry: GC-MS data processing (with XCMS, RAMClustR, RIAssigner, and matchms)